Download kegg pathways of provided pathway id list from keggrest and generate kegg collection — generate.kegg.collection • psf

Download kegg pathways of provided pathway id list from keggrest and generate kegg collection

Usage

generate.kegg.collection(pathway.id.list, out.dir, sink.nodes = T)

Arguments

pathway.id.list: charachter vector of pathway ids (hsa04151)
out.dir: path to the directory where kgmls will be downloded
sink.nodes: determin sink nodes, logical TRUE or FALSE